The structural basis for the selective antagonism of soluble TNF-alpha by shark variable new antigen receptors.

Publication Type:

Journal Article

Source:

Nat Commun (2025)

Abstract:

<p>The pro-inflammatory cytokine tumor necrosis factor-alpha (TNF-α) is synthesized as transmembrane TNF-α (tmTNF-α) where proteolytic processing releases soluble TNF-α (sTNF-α). tmTNF-α can act as either a ligand by activating TNF receptors, or a receptor that transmits reverse (outside-to-inside) signalling after binding to native receptors. All TNF-α therapies bind tmTNF-α and induce reverse signalling which can result in immunosuppression leading to infection. We present crystal structures of two anti-TNF-α Variable New Antigen Receptors (VNARs) in complex with sTNF-α via two distinct epitopes. The VNAR-D1 recognizes an epitope that selectively engages sTNF-α while VNAR-C4 binds an epitope that partially overlaps with other biologic therapies. In activated CD4 T cells, our VNARs do not induce reverse signalling in contrast to currently available therapies. Our findings suggest that neutralization through a unique mechanism may lead to anti-TNF-α agents with an improved safety profile that will benefit high-risk patients.</p>

PDB: 
Structures of TNF-α in complex with VNAR-D1 and VNAR-C4 are original to this work and can be found with accession codes 9DJW and 9BN7.
Detector: 
EIGER2
Beamline: 
24-ID-C
9BN7, X-ray crystal structure of TNFa-VNAR C4 complex