Publications

Found 984 results
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2026
Meeks, K. R., Mattingly, C. J., Nix, J. C., Chuk, O., Protopopov, M. V., Tarkhanova, O. O., and Tanner, J. J. (2026) Serendipitous Discovery of an Allosteric Inhibitor Binding Groove in the Proline Biosynthetic Enzyme Pyrroline-5-Carboxylate Reductase 1 (PYCR1). Biochem J. 10.1042/BCJ20250278
Lee, G. Rie, Pellock, S. J., Norn, C., Tischer, D., Dauparas, J., Anishchenko, I., Mercer, J. A. M., Kang, A., Bera, A. K., Nguyen, H., Brackenbrough, E., Sankaran, B., Goreshnik, I., Vafeados, D., Roullier, N., Han, H. L., Coventry, B., Haddox, H. K., Liu, D. R., Yeh, A. Hsien- Wei, and Baker, D. (2026) Small-molecule binding and sensing with a designed protein family. Nat Commun. 10.1038/s41467-026-70953-8
Shibata, S., Wang, M. Y., Imasaki, T., Shigematsu, H., La Torre, D. Ugarte, Wei, Y., Jobichen, C., Hagio, H., Sivaraman, J., Sugita, Y., Endow, S. A., and Nitta, R. (2026) Structural analysis of a motor with increased mechanical output reveals new transitions in kinesin microtubule motility. Sci Rep. 16, 487
Bhuket, P. Ratnatilak, Eastwood, J. R. B., Qin, Z., Kessler, J. L., Li, Y., Katz, D., Whitby, F. G., Hill, C. P., Kirshenbaum, K., and S Yu, M. (2026) Structural and Positional Effects of Peptoid Residues on Triple Helix Stability. Biomacromolecules. 10.1021/acs.biomac.5c02232
Bonsor, D. A., Finci, L. I., Potter, J. R., Young, L. C., Wall, V. E., de Salazar, R. Goldstein, Geis, K. R., Stephens, T., Finney, J., Nissley, D. V., McCormick, F., and Simanshu, D. K. (2026) Structure of SHOC2-KRAS-PP1C complex reveals RAS isoform-specific determinants and insights into targeting complex assembly by RAS inhibitors. Nat Commun. 10.1038/s41467-026-68319-1
2025
Hekstra, D. R., Wang, H. K., Klureza, M. A., Greisman, J. B., and Dalton, K. M. (2025) Sensitive detection of structural dynamics using a statistical framework for comparative crystallography. Sci Adv. 11, eadj2921
Zawistowski, R. K., Clark, J. C., and Crane, B. R. (2025) Sortase-mediated ligation of cytochrome c peroxidase and cytochrome c highlights the roles of dynamics and conformational specificity for interprotein electron transfer. J Inorg Biochem. 274, 113108
DeWeese, D. E., Everett, M. P., Babicz, J. T., Daruwalla, A., Solomon, E. I., and Kiser, P. D. (2025) Spectroscopy and crystallography define carotenoid oxygenases as a new subclass of mononuclear non-heme Fe enzymes. J Biol Chem. 301, 108444
Carmona-Rosas, G., Li, J., Smith, J. J., Nawrocka, W. I., Cheng, S., Baltrusaitis, E. E., Zhao, M., Araç, D., Kratsios, P., and zkan, E. Ö. (2025) Structural basis and functional roles for Toll-like receptor binding to Latrophilin in C. elegans development.. Nat Struct Mol Biol. 10.1038/s41594-025-01592-8
Waschbüsch, D., Pal, P., Nirujogi, R. S., Cavin, M., Singh, J., Alessi, D. R., and Khan, A. R. (2025) Structural basis for binding of RILPL1 to TMEM55B reveals a lysosomal platform for adaptor assembly through a conserved peptide motif. Structure. 10.1016/j.str.2025.11.003
M Joyce, G., Bu, W., Chen, W. - H., Gillespie, R. A., Andrews, S. F., Wheatley, A. K., Tsybovsky, Y., Jensen, J. L., Stephens, T., Prabhakaran, M., Fisher, B. E., Narpala, S. R., Bagchi, M., McDermott, A. B., Nabel, G. J., Kwong, P. D., Mascola, J. R., Cohen, J. I., and Kanekiyo, M. (2025) Structural basis for complement receptor engagement and virus neutralization through Epstein-Barr virus gp350. Immunity. 58, 295-308.e5
Dharmaiah, S., Bonsor, D. A., Mo, S. P., Fernandez-Cabrera, A., Chan, A. H., Messing, S., Drew, M., Vega, M., Nissley, D. V., Esposito, D., Castel, P., and Simanshu, D. K. (2025) Structural basis for LZTR1 recognition of RAS GTPases for degradation. Science. 389, 1112-1117
Ubah, O. C., Lake, E. W., Ott, K. L., Priyanka, S., Celeda, S., West, J. L., Gunaratne, G. S., Shi, K., Moeller, N. H., Porter, A. J., Aihara, H., Kosoff, D., LeBeau, A. M., and Barelle, C. J. (2025) The structural basis for the selective antagonism of soluble TNF-alpha by shark variable new antigen receptors. Nat Commun. 10.1038/s41467-025-66967-3
Esler, M. A., Shi, K., Rollie, J. A., Delgado, R., Vishwakarma, J., Dabrowska, A., Prahlad, J., Moghadasi, S. Arad, Harris, R. S., and Aihara, H. (2025) Structural basis for varying drug resistance of SARS-CoV-2 M E166 variants. mBio. 16, e0262424
Alpsoy, A., Ipsaro, J. J., Skopelitis, D., Pal, S., Chung, F. S., Carpenter, S., Desmarais, J. J., Wu, X. S., Chang, K., DiMare, M. T., Harten, E., Bergman, S., Kinney, J. B., Engelman, J. A., Bhang, H. - E. C., Joshua-Tor, L., and Vakoc, C. R. (2025) Structural basis of DNA-dependent coactivator recruitment by the tuft cell master regulator POU2F3. Cell Rep. 10.1016/j.celrep.2025.116572
Gong, M., Ye, Q., Gu, Y., Chambers, L. R., Bobkov, A. A., Arakawa, N. K., Matyszewski, M., and Corbett, K. D. (2025) Structural diversity and oligomerization of bacterial ubiquitin-like proteins. Structure. 33, 1016-1026.e4
Montermoso, S., Eilers, G., Allen, A., Sharp, R., Hwang, Y., Bushman, F. D., Gupta, K., and Van Duyne, G. (2025) Structural Impact of Ex Vivo Resistance Mutations on HIV-1 Integrase Polymers Induced by Allosteric Inhibitors. J Mol Biol. 437, 169224
DeAngelo, T. M., Adhikary, U., Korshavn, K. J., Seo, H. - S., Brotzen-Smith, C. R., Camara, C. M., Dhe-Paganon, S., Bird, G. H., Wales, T. E., and Walensky, L. D. (2025) Structural insights into chemoresistance mutants of BCL-2 and their targeting by stapled BAD BH3 helices. Nat Commun. 16, 8623
Syroegin, E. A., Aleksandrova, E. V., Kruglov, A. A., Paranjpe, M. N., Svetlov, M. S., and Polikanov, Y. S. (2025) Structural insights into context-specific inhibition of bacterial translation by macrolides. Nat Commun. 16, 9685
Czyzyk, D., Yan, W., Messing, S., Gillette, W., Tsuji, T., Yamaguchi, M., Furuzono, S., Turner, D. M., Esposito, D., Nissley, D. V., McCormick, F., and Simanshu, D. K. (2025) Structural insights into isoform-specific RAS-PI3Kα interactions and the role of RAS in PI3Kα activation.. Nat Commun. 16, 525
Misra, A., Rahisuddin, R., Parihar, M., Arya, S., Viswanathan, T., Jackson, N., Qi, S., Chan, S. - H., Harris, R. S., Martinez-Sobrido, L., and Gupta, Y. K. (2025) Structural insights into the assembly and regulation of 2'-O RNA methylation by SARS-CoV-2 nsp16/nsp10. Structure. 33, 1027-1039.e4
Wickramaratne, A. C., Rasmussen, E. Sjulstok, Chelliah, Y., Schuhmann, F., Solov'yov, I. A., Mouritsen, H., Green, C. B., Zoltowski, B. D., and Takahashi, J. S. (2025) Structure of European robin cryptochrome 1 reveals a role in circadian rhythms, not magnetoreception. iScience. 28, 114015
Trasviña-Arenas, C. H., Dissanayake, U. C., Tamayo, N., Hashemian, M., Lin, W. - J., Demir, M., Hoyos-Gonzalez, N., Fisher, A. J., G Cisneros, A., Horvath, M. P., and David, S. S. (2025) Structure of human MUTYH and functional profiling of cancer-associated variants reveal an allosteric network between its [4Fe-4S] cluster cofactor and active site required for DNA repair. Nat Commun. 16, 3596
Yirmiya, E., Hobbs, S. J., Leavitt, A., Osterman, I., Avraham, C., Hochhauser, D., Madhala, B., Skovorodka, M., Tan, J. M. J., Toyoda, H. C., Chebotar, I., Itkin, M., Malitsky, S., Amitai, G., Kranzusch, P. J., and Sorek, R. (2025) Structure-guided discovery of viral proteins that inhibit host immunity. Cell. 10.1016/j.cell.2024.12.035
Jacewicz, A., Damha, M. J., and Shuman, S. (2025) Structures of RNA phosphotransferase Tpt1 reveal distinct binding modes for an RNA 2'-PO splice junction versus a 5'-PO mononucleotide. RNA. 31, 916-922

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